SepsisPhase 2NCT03644940
Subpopulation-Specific Sepsis Identification Using Machine Learning
A Phase 2 study testing CustomSight in people with Sepsis and Severe Sepsis, run by Dascena.
Trial summary
The focus of this study will be to conduct a prospective, randomized controlled trial (RCT) at Cape Regional Medical Center (CRMC), Oroville Hospital (OH), and UCSF Medical Center (UCSF) in which a subpopulation-optimized algorithm will be applied to EHR data for the detection of severe sepsis. Read more about this study
- Who is it for?
- Ages 18 years and olderHealthy volunteers can take part
- Conditions the study is for
- Sepsis, Severe Sepsis, Septic Shock
- What is being tested?
- CustomSight
- Could I receive a placebo?
- No, everyone receives an active treatment
- How many people
- 0 participants
- Where
- No sites listed yet
- Study dates
- Dec 2020to Jul 2021
- Phase
- Phase 2
- Are there results?
- None posted in the registry
Key requirements
Who can take part, as listed by the sponsor. Only the study team can confirm whether you are eligible, so take this list to your doctor.
- Ages 18 years and older
- All sexes
- Healthy volunteers accepted
- Adult, Older adult
All adults above age 18 who are a member of one of the eight subpopulations studied in this trial (Cardiology, Gastroenterology (GI), Intensive Care Unit (ICU), Medicine, Oncology, Surgery, Transplant, and Emergency Department (ED)) are eligible to participate in the study.
About this study
The focus of this study will be to conduct a prospective, randomized controlled trial (RCT) at Cape Regional Medical Center (CRMC), Oroville Hospital (OH), and UCSF Medical Center (UCSF) in which a subpopulation-optimized algorithm will be applied to EHR data for the detection of severe sepsis. For patients determined to have a high risk of severe sepsis, the algorithm will generate automated voice, telephone notification to nursing staff at CRMC, OH, and UCSF. The algorithm's performance will be measured by analysis of the primary endpoint, in-hospital SIRS-based mortality. The secondary endpoints will be in-hospital severe sepsis/shock-coded mortality, SIRS-based hospital length of stay, and severe sepsis/shock-coded hospital length of stay.
Read the detailed description
From July 2020 to February 2021, inclusive, we will perform a randomized controlled trial (RCT) across eight subpopulations at CRMC, OH, and UCSF. The subpopulations which will be included in the trial are: Cardiology, Gastroenterology (GI), Intensive Care Unit (ICU), Medicine, Oncology, Surgery, Transplant, and Emergency Department (ED). All aims of this study across both phases including the RCT have been approved by the Pearl Institutional Review Board with a waiver of informed consent (IRB00007772, FWA00026887).
During the study period, all patients over the age of 18 presenting to the emergency department or admitted to an inpatient unit at the participating facilities will automatically be enrolled in the trial if they are a member of one of the eight subpopulations of interest in this study, until the target enrollment for the study is met. Enrollment will entail randomization to either the control or the experimental arms. Patients will be assigned to the experimental group or control group based on a random allocation sequence, generated by a computer program before the start of the trial, using simple randomization, with a 1:1 allocation ratio. This allocation sequence will be concealed to patients, healthcare providers and study investigators. However the trial will have an open-label design, as full blinding is not possible as some group assignments will become naturally revealed upon receipt of telephonic alerts.
There will be two arms in the study. The control arm will involve patients monitored by the original version of InSight, and the experimental arm will involve patients monitored by the subpopulation-customized version of InSight. In both arms, if the applicable algorithm determines a patient to be at high risk for severe sepsis, a telephonic alert will be sent to the charge nurse on duty in the patient's current location. Response to alerts will follow the protocol from our previous sepsis clinical trial. The procedure consists of a nurse conducting a patient bedside evaluation to rule out suspected infection. This includes assessment of patient vital signs, EHR notes, and recent laboratory results. If the nurse suspects severe sepsis, a physician subsequently assesses the patient and, if appropriate, places an order for administration of the standard sepsis treatment bundle.
In the administration of clinical trials, some open-label studies are cluster-randomized while others are randomized at an individual patient level. Cluster randomization is frequently used to minimize "contamination" between treatment and control groups, because exposure of providers to patients from both arms in an open-label study often invites unintentional behavioral biases. These biases may cause providers to adjust their interventions in the control group to mimic their actions in the experimental group, thereby masking the intervention's effect and skewing the study results towards the null. Although open-label, cluster-randomized trials are effective in minimizing contamination among groups, they have several significant disadvantages, including greater complexity in design and analysis as well as larger patient enrollment requirements to achieve the same statistical power. Because larger sample sizes often necessitate increases in cost, length, or complexity of a trial, current research has indicated that trialists should use individual randomization if possible due to the drawbacks of cluster allocation. Given these considerations, we concluded that individual randomization was the best strategy for our trial, as it affords a significant amount of increase in statistical power and allows each patient outcome to be assessed independently of every other patient. To minimize possible bias, we also decided to make the automated phone call text identical in both arms. The successful use of patient-level randomization in our previous sepsis clinical trial gives us confidence in this trial design.
After the discharge of the last enrolled patient, we will evaluate whether the primary endpoint of in-hospital SIRS-based mortality and secondary endpoints of in-hospital severe sepsis/shock-coded mortality, SIRS-based hospital length of stay, and severe sepsis/shock-coded hospital length of stay are met. Additional outcome measures of interest for each SIRS-based and severe sepsis/shock-coded patient groups will include: time to completion of each element of the Surviving Sepsis Campaign (SSC) bundle; ventilator-free days; ICU days; and 30-day hospital readmission rate. The 1-hour SSC bundle consists of obtaining blood cultures, measuring lactate level, administering broad-spectrum antibiotics, administering 30 mL/kg of crystalloid fluid for hypertension or lactate >4 mmol/L, and applying vasopressors if patient is hypotensive during or after fluid resuscitation.
Patients will be considered "SIRS-based" and included for primary endpoint analysis if they meet two or more SIRS criteria at any point during their stay. The reason for this inclusion criteria is that the algorithm may detect severe sepsis before it is apparent in the chart, and therefore sepsis may be resolved with early intervention prior to severe sepsis documentation in the medical record. For example, if a CDS alert results in treatment initiation before organ dysfunction indicative labs are drawn, the patient's state of "severe sepsis" may be censored out. Limiting inclusion criteria to the 2001 consensus (Sepsis-2) severe sepsis definition criteria or the Sepsis-3 criteria would exclude such patients from analysis; however, such censorship will be avoided with our use of SIRS-based inclusion criteria.
We plan to draw from EHR-based clinical data for primary endpoint analysis, as opposed to claims-based data, due to its ability to provide more objective measurements on patient outcomes. However, to compare to other studies that use coding-based inclusion, claims data will be used in inclusion criteria for secondary endpoints. Patients will be considered to be documented "severe sepsis/septic shock-coded" and included for secondary endpoint analysis if they meet either Angus implementation criteria or any of the following diagnosis codes: R6520 and/or R6521 with septicemia codes A400, A401, A403, A408, A4101, A4102, A411, A412, A413, A414, A4150, A4151, A4152, A4153, A4159, A4181, A4189, A427, A021, A227, A267, A327, A5486, B377. The use of explicit ICD codes alone for tracking sepsis is known to have high specificity but low sensitivity.
At the conclusion of the study, significant findings will be published as scientific papers.
- Conditions
- Sepsis, Severe Sepsis, Septic Shock
- Being tested
- CustomSight
- Keywords
- Dascena, patient mortality, machine learning, algorithm, diagnostic
- Medical subject headings
- Sepsis, Shock, Septic, Disease
What participants receive
What participants receive. In a randomised study each person is assigned to one group by chance.
CustomSightDiagnostic test
Subpopulation-specific clinical decision support (CDS) system for severe sepsis detection
| Study group | Role | What they receive |
|---|---|---|
| Subpopulation-specific Algorithm | Experimental | Not described Receives: Diagnostic Test: CustomSight |
| Control Algorithm | No intervention | Not described |
What is being measured
The primary outcome is the main question the study is designed to answer.
In-hospital SIRS-based mortality
Mortality attributed to patients meeting two or more SIRS criteria at some point during their stay
Measured: Through study completion, an average of 8 months
Secondary outcomes (3)
In-hospital severe sepsis/shock-coded mortality
Mortality attributed to patients coded as severe sepsis or septic shock
Measured: Through study completion, an average of 8 months
SIRS-based hospital length of stay
Hospital length of stay attributed to patients meeting two or more SIRS criteria at some point during their stay
Measured: Through study completion, an average of 8 months
Severe sepsis/shock-coded hospital length of stay
Hospital length of stay attributed to patients coded as severe sepsis or septic shock
Measured: Through study completion, an average of 8 months
Timeline
From the start of the study to its completion; the mark is today. Estimated dates are the sponsor’s plan.
- First posted23 Aug 2018
- Study startDec 2020 (estimated)
- Primary completionJul 2021 (estimated)
- Study completionJul 2021 (estimated)
Why it stopped: study not started.
Resources
- Official record on ClinicalTrials.govThe registry entry this page is built from, with its full change history.
- Publications (5)Papers the sponsor has linked to this study.
- Other trials for SepsisStudies of the same condition, open and under way.
- What the trial phases meanHow a treatment moves from first tests in people to approval.
More details
For doctors and researchers: how the study is designed, who runs it, and its registry IDs.
Study design
- Study type
- Interventional
- Phase
- Phase 2
- Primary purpose
- Diagnosis
- Allocation
- Randomised
- Intervention model
- Parallel groups
- Masking
- Triple blind
- Who is masked
- Participant, Care provider, Investigator
- Enrolment
- 0 participants (actual)
Sponsor and investigators
- Lead sponsor
- Dascena
- Sponsor type
- Industry (pharma, biotech, devices)
- Collaborators
- University of California, San Francisco
- Responsible party
- Sponsor
- Investigators
- Ritankar Das, MSc, Principal investigator, Dascena
IDs, dates and publications
- ClinicalTrials.gov ID
- NCT03644940
- Sponsor's protocol ID
- 18-347718
- Status last verified
- Sep 2021
- First submitted
- 16 Aug 2018
- Last updated
- 23 Sep 2021
- Results posted
- No
- FDA-regulated drug
- No
- FDA-regulated device
- No
Publications
Desautels T, Calvert J, Hoffman J, Mao Q, Jay M, Fletcher G, Barton C, Chettipally U, Kerem Y, Das R. Using Transfer Learning for Improved Mortality Prediction in a Data-Scarce Hospital Setting. Biomed Inform Insights. 2017 Jun 12;9:1178222617712994. doi: 10.1177/1178222617712994. eCollection 2017.
PubMed 28638239Calvert J, Mao Q, Rogers AJ, Barton C, Jay M, Desautels T, Mohamadlou H, Jan J, Das R. A computational approach to mortality prediction of alcohol use disorder inpatients. Comput Biol Med. 2016 Aug 1;75:74-9. doi: 10.1016/j.compbiomed.2016.05.015. Epub 2016 May 24.
PubMed 27253619Calvert JS, Price DA, Barton CW, Chettipally UK, Das R. Discharge recommendation based on a novel technique of homeostatic analysis. J Am Med Inform Assoc. 2017 Jan;24(1):24-29. doi: 10.1093/jamia/ocw014. Epub 2016 Mar 28.
PubMed 27026611Calvert J, Mao Q, Hoffman JL, Jay M, Desautels T, Mohamadlou H, Chettipally U, Das R. Using electronic health record collected clinical variables to predict medical intensive care unit mortality. Ann Med Surg (Lond). 2016 Sep 6;11:52-57. doi: 10.1016/j.amsu.2016.09.002. eCollection 2016 Nov.
PubMed 27699003Shimabukuro DW, Barton CW, Feldman MD, Mataraso SJ, Das R. Effect of a machine learning-based severe sepsis prediction algorithm on patient survival and hospital length of stay: a randomised clinical trial. BMJ Open Respir Res. 2017 Nov 9;4(1):e000234. doi: 10.1136/bmjresp-2017-000234. eCollection 2017.
PubMed 29435343
Study at a glance
From the registry record, last updated by the sponsor on 23 Sep 2021. Recruitment status is as the sponsor reported it: confirm with the study team.
- Official title
- Subpopulation-Specific Sepsis Identification Using Machine Learning
- ClinicalTrials.gov ID
- NCT03644940
- Acronym / sponsor ID
- 18-347718
- Conditions
- Sepsis, Severe Sepsis, Septic Shock
- Keywords
- Dascena, patient mortality, machine learning, algorithm, diagnostic
- Phase
- Phase 2
- Study type
- Interventional
- Recruitment status
- WithdrawnReason stopped: study not started.
- Enrolment
- 0 participants (actual)
- Lead sponsor
- DascenaIndustry (pharma, biotech, devices)
- Collaborators
- University of California, San Francisco
- Study start
- Dec 2020 (estimated)
- Primary completion
- Jul 2021 (estimated)
- Study completion
- Jul 2021 (estimated)
- First posted
- 23 Aug 2018 (actual)
- Results
- Not posted in the source record
Clinical summary
The research question as the sponsor registered it. This describes what the study plans to test, not what it found.
The focus of this study will be to conduct a prospective, randomized controlled trial (RCT) at Cape Regional Medical Center (CRMC), Oroville Hospital (OH), and UCSF Medical Center (UCSF) in which a subpopulation-optimized algorithm will be applied to EHR data for the detection of severe sepsis. For patients determined to have a high risk of severe sepsis, the algorithm will generate automated voice, telephone notification to nursing staff at CRMC, OH, and UCSF. The algorithm's performance will be measured by analysis of the primary endpoint, in-hospital SIRS-based mortality. The secondary endpoints will be in-hospital severe sepsis/shock-coded mortality, SIRS-based hospital length of stay, and severe sepsis/shock-coded hospital length of stay.
Detailed description
From July 2020 to February 2021, inclusive, we will perform a randomized controlled trial (RCT) across eight subpopulations at CRMC, OH, and UCSF. The subpopulations which will be included in the trial are: Cardiology, Gastroenterology (GI), Intensive Care Unit (ICU), Medicine, Oncology, Surgery, Transplant, and Emergency Department (ED). All aims of this study across both phases including the RCT have been approved by the Pearl Institutional Review Board with a waiver of informed consent (IRB00007772, FWA00026887).
During the study period, all patients over the age of 18 presenting to the emergency department or admitted to an inpatient unit at the participating facilities will automatically be enrolled in the trial if they are a member of one of the eight subpopulations of interest in this study, until the target enrollment for the study is met. Enrollment will entail randomization to either the control or the experimental arms. Patients will be assigned to the experimental group or control group based on a random allocation sequence, generated by a computer program before the start of the trial, using simple randomization, with a 1:1 allocation ratio. This allocation sequence will be concealed to patients, healthcare providers and study investigators. However the trial will have an open-label design, as full blinding is not possible as some group assignments will become naturally revealed upon receipt of telephonic alerts.
There will be two arms in the study. The control arm will involve patients monitored by the original version of InSight, and the experimental arm will involve patients monitored by the subpopulation-customized version of InSight. In both arms, if the applicable algorithm determines a patient to be at high risk for severe sepsis, a telephonic alert will be sent to the charge nurse on duty in the patient's current location. Response to alerts will follow the protocol from our previous sepsis clinical trial. The procedure consists of a nurse conducting a patient bedside evaluation to rule out suspected infection. This includes assessment of patient vital signs, EHR notes, and recent laboratory results. If the nurse suspects severe sepsis, a physician subsequently assesses the patient and, if appropriate, places an order for administration of the standard sepsis treatment bundle.
In the administration of clinical trials, some open-label studies are cluster-randomized while others are randomized at an individual patient level. Cluster randomization is frequently used to minimize "contamination" between treatment and control groups, because exposure of providers to patients from both arms in an open-label study often invites unintentional behavioral biases. These biases may cause providers to adjust their interventions in the control group to mimic their actions in the experimental group, thereby masking the intervention's effect and skewing the study results towards the null. Although open-label, cluster-randomized trials are effective in minimizing contamination among groups, they have several significant disadvantages, including greater complexity in design and analysis as well as larger patient enrollment requirements to achieve the same statistical power. Because larger sample sizes often necessitate increases in cost, length, or complexity of a trial, current research has indicated that trialists should use individual randomization if possible due to the drawbacks of cluster allocation. Given these considerations, we concluded that individual randomization was the best strategy for our trial, as it affords a significant amount of increase in statistical power and allows each patient outcome to be assessed independently of every other patient. To minimize possible bias, we also decided to make the automated phone call text identical in both arms. The successful use of patient-level randomization in our previous sepsis clinical trial gives us confidence in this trial design.
After the discharge of the last enrolled patient, we will evaluate whether the primary endpoint of in-hospital SIRS-based mortality and secondary endpoints of in-hospital severe sepsis/shock-coded mortality, SIRS-based hospital length of stay, and severe sepsis/shock-coded hospital length of stay are met. Additional outcome measures of interest for each SIRS-based and severe sepsis/shock-coded patient groups will include: time to completion of each element of the Surviving Sepsis Campaign (SSC) bundle; ventilator-free days; ICU days; and 30-day hospital readmission rate. The 1-hour SSC bundle consists of obtaining blood cultures, measuring lactate level, administering broad-spectrum antibiotics, administering 30 mL/kg of crystalloid fluid for hypertension or lactate >4 mmol/L, and applying vasopressors if patient is hypotensive during or after fluid resuscitation.
Patients will be considered "SIRS-based" and included for primary endpoint analysis if they meet two or more SIRS criteria at any point during their stay. The reason for this inclusion criteria is that the algorithm may detect severe sepsis before it is apparent in the chart, and therefore sepsis may be resolved with early intervention prior to severe sepsis documentation in the medical record. For example, if a CDS alert results in treatment initiation before organ dysfunction indicative labs are drawn, the patient's state of "severe sepsis" may be censored out. Limiting inclusion criteria to the 2001 consensus (Sepsis-2) severe sepsis definition criteria or the Sepsis-3 criteria would exclude such patients from analysis; however, such censorship will be avoided with our use of SIRS-based inclusion criteria.
We plan to draw from EHR-based clinical data for primary endpoint analysis, as opposed to claims-based data, due to its ability to provide more objective measurements on patient outcomes. However, to compare to other studies that use coding-based inclusion, claims data will be used in inclusion criteria for secondary endpoints. Patients will be considered to be documented "severe sepsis/septic shock-coded" and included for secondary endpoint analysis if they meet either Angus implementation criteria or any of the following diagnosis codes: R6520 and/or R6521 with septicemia codes A400, A401, A403, A408, A4101, A4102, A411, A412, A413, A414, A4150, A4151, A4152, A4153, A4159, A4181, A4189, A427, A021, A227, A267, A327, A5486, B377. The use of explicit ICD codes alone for tracking sepsis is known to have high specificity but low sensitivity.
At the conclusion of the study, significant findings will be published as scientific papers.
Study design
- Primary purpose
- Diagnosis
- Allocation
- Randomised
- Intervention model
- Parallel groups
- Masking
- Triple blind (participant, care provider, investigator)
- Number of arms
- 2
| Arm | Type | Receives |
|---|---|---|
| Subpopulation-specific Algorithm | Experimental | Diagnostic Test: CustomSight |
| Control Algorithm | No intervention | – |
Who may qualify
- Ages
- 18 years and older
- Sex
- All
- Healthy volunteers
- Accepted
- Age groups
- Adult, Older adult
Eligibility is decided by the study team after screening; this overview does not establish that a patient qualifies. Full inclusion and exclusion criteria.
Interventions
| Intervention | Type | Arms |
|---|---|---|
| CustomSightSubpopulation-specific clinical decision support (CDS) system for severe sepsis detection | Diagnostic test | Subpopulation-specific Algorithm |
Primary outcome
In-hospital SIRS-based mortality
Time frame: Through study completion, an average of 8 months
Mortality attributed to patients meeting two or more SIRS criteria at some point during their stay
3 secondary outcomes
In-hospital severe sepsis/shock-coded mortality
Time frame: Through study completion, an average of 8 months
SIRS-based hospital length of stay
Time frame: Through study completion, an average of 8 months
Severe sepsis/shock-coded hospital length of stay
Time frame: Through study completion, an average of 8 months
Results and safety
The study was withdrawn before enrolling participants, so there are no results.
Research links
- Official record on ClinicalTrials.govLast updated by the sponsor 23 Sep 2021.
- Background: PubMed 28638239Desautels T, Calvert J, Hoffman J, Mao Q, Jay M, Fletcher G, Barton C, Chettipally U, Kerem Y, Das R. Using Transfer Learning for Improved Mortality Prediction in a Data-Scarce Hospital Setting. Biomed Inform Insights. 2017 Jun 12;9:1178222617712994. doi: 10.1177/1178222617712994. eCollection 2017.
- Background: PubMed 27253619Calvert J, Mao Q, Rogers AJ, Barton C, Jay M, Desautels T, Mohamadlou H, Jan J, Das R. A computational approach to mortality prediction of alcohol use disorder inpatients. Comput Biol Med. 2016 Aug 1;75:74-9. doi: 10.1016/j.compbiomed.2016.05.015. Epub 2016 May 24.
- Background: PubMed 27026611Calvert JS, Price DA, Barton CW, Chettipally UK, Das R. Discharge recommendation based on a novel technique of homeostatic analysis. J Am Med Inform Assoc. 2017 Jan;24(1):24-29. doi: 10.1093/jamia/ocw014. Epub 2016 Mar 28.
- Background: PubMed 27699003Calvert J, Mao Q, Hoffman JL, Jay M, Desautels T, Mohamadlou H, Chettipally U, Das R. Using electronic health record collected clinical variables to predict medical intensive care unit mortality. Ann Med Surg (Lond). 2016 Sep 6;11:52-57. doi: 10.1016/j.amsu.2016.09.002. eCollection 2016 Nov.
- Background: PubMed 29435343Shimabukuro DW, Barton CW, Feldman MD, Mataraso SJ, Das R. Effect of a machine learning-based severe sepsis prediction algorithm on patient survival and hospital length of stay: a randomised clinical trial. BMJ Open Respir Res. 2017 Nov 9;4(1):e000234. doi: 10.1136/bmjresp-2017-000234. eCollection 2017.
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Referral and contact
AzTrials does not enrol participants or take referrals. Contact the study team or a site listed below; they decide who can take part. This study is not recruiting at the moment.
Ritankar Das, MSc principal investigator
Dascena
Questions about this trial
What is this clinical trial studying?
A Phase 2 study testing CustomSight in people with Sepsis and Severe Sepsis, run by Dascena.
The full registered description is in the About this study section and the official record.
Who may be eligible to take part?
Eligibility is decided by the study team after screening, so read the full criteria and contact a listed site.
Is this clinical trial currently recruiting?
The record says: withdrawn, as of the sponsor's last update on 23 Sep 2021. Status can change between updates, so confirm with the study contact before making plans.
What are the possible benefits and risks?
They depend on the study and the treatment, and no study can promise a benefit. The study team explains the known risks during informed consent, before anyone joins; the record itself does not list them.
What does this phase mean?
Phase 2 studies give the treatment to a larger group to see whether it has the intended effect and to keep checking safety.
Not every study follows the same path, and some studies (observational studies, device studies) have no phase.
Are results available for this study?
The study was withdrawn before enrolling participants, so there are no results.
How can a doctor refer a patient or contact the research team?
The record lists no contact. The official record names the sponsor, who can be asked directly. AzTrials does not enrol participants or take referrals.
What does the primary outcome measure?
In-hospital SIRS-based mortality (time frame: Through study completion, an average of 8 months). It is what the study was designed to measure, not a finding.
Where can I read the original study information?
On the ClinicalTrials.gov record for NCT03644940, which also lists 5 linked publications.
Does a listing mean the treatment is approved or proven to work?
No. A listing means the study is registered. It does not show that the treatment is safe, works, or is approved by a regulator.
How often is this information updated?
AzTrials copies changed records from ClinicalTrials.gov every night and reloads the whole registry every week. The sponsor last updated this record on 23 Sep 2021.